RRBSdata

This is the development version of RRBSdata; for the stable release version, see RRBSdata.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0

An RRBS data set with 12 samples and 10,000 simulated DMRs

Bioconductor version: Development (3.24)

RRBS data set comprising 12 samples with simulated differentially methylated regions (DMRs).

Author: Katja Hebestreit, Hans-Ulrich Klein

Maintainer: Katja Hebestreit <katja.hebestreit at gmail.com>

Citation (from within R, enter citation("RRBSdata")):

Katja Hebestreit, Hans-Ulrich Klein. RRBSdata: An RRBS data set with 12 samples and 10,000 simulated DMRs. doi:10.18129/B9.bioc.RRBSdata, R package version 1.33.0, https://bioconductor.org/packages/RRBSdata.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("RRBSdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RRBSdata")

An RRBS data set with 12 samples and 10,000 simulated DMRs.	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	CancerData, CpGIslandData, ExperimentData, SequencingData
Version	1.33.0
In Bioconductor since	BioC 3.0 (R-3.1) (12 years)
License	LGPL-3
Depends	R (>= 3.5.0), BiSeq (>= 1.9.2)
Imports
System Requirements
URL

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Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RRBSdata_1.33.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/RRBSdata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RRBSdata
Package Short Url	https://bioconductor.org/packages/RRBSdata/
Package Downloads Report	Download Stats