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HDO.db

This is the development version of HDO.db; for the stable release version, see HDO.db.

A set of annotation maps describing the entire Human Disease Ontology


Bioconductor version: Development (3.19)

A set of annotation maps describing the entire Human Disease Ontology assembled using data from DO. Its annotation data comes from https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology.

Author: Erqiang Hu [aut, cre] , Guangchuang Yu [aut, ctb]

Maintainer: Erqiang Hu <13766876214 at 163.com>

Citation (from within R, enter citation("HDO.db")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("HDO.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HDO.db")
HDO_vignette HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, FunctionalAnnotation
Version 0.99.1
License Artistic-2.0
Depends R (>= 4.2.0)
Imports AnnotationDbi, methods, utils
System Requirements
URL
Bug Reports https://github.com/YuLab-SMU/HDO.db/issues
See More
Suggests rmarkdown, knitr, testthat (>= 3.0.0)
Linking To
Enhances
Depends On Me
Imports Me DOSE
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HDO.db_0.99.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/HDO.db/
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