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FDb.InfiniumMethylation.hg19

This is the development version of FDb.InfiniumMethylation.hg19; for the stable release version, see FDb.InfiniumMethylation.hg19.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11

Annotation package for Illumina Infinium DNA methylation probes


Bioconductor version: Development (3.24)

Compiled HumanMethylation27 and HumanMethylation450 annotations

Author: Tim Triche, Jr.

Maintainer: Tim Triche, Jr. <tim.triche at gmail.com>

Citation (from within R, enter citation("FDb.InfiniumMethylation.hg19")):

Tim Triche, Jr. FDb.InfiniumMethylation.hg19: Annotation package for Illumina Infinium DNA methylation probes. doi:10.18129/B9.bioc.FDb.InfiniumMethylation.hg19, R package version 2.2.0, https://bioconductor.org/packages/FDb.InfiniumMethylation.hg19.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("FDb.InfiniumMethylation.hg19")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF
Need some help? Ask on the Bioconductor Support site!

Details

biocViews AnnotationData, DNAMethylation, Homo_sapiens
Version2.2.0
In Bioconductor sinceBioC 2.11 (R-2.15) (14 years)
License Artistic-2.0
Depends R (>= 2.10), GenomicFeatures (>= 1.7.22), TxDb.Hsapiens.UCSC.hg19.knownGene, org.Hs.eg.db
Imports GenomicFeatures, AnnotationDbi, Biostrings
System Requirements
URL
See More
Suggests FDb.UCSC.snp135common.hg19
Linking To
Enhances
Depends On Me methylumi
Imports Me
Suggests Me omicsPrint
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package FDb.InfiniumMethylation.hg19_2.2.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/FDb.InfiniumMethylation.hg19/
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