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BSgenome.Hsapiens.1000genomes.hs37d5

This is the development version of BSgenome.Hsapiens.1000genomes.hs37d5; for the stable release version, see BSgenome.Hsapiens.1000genomes.hs37d5.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1

1000genomes Reference Genome Sequence (hs37d5)


Bioconductor version: Development (3.24)

1000genomes Phase2 Reference Genome Sequence (hs37d5), based on NCBI GRCh37.

Author: Julian Gehring

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("BSgenome.Hsapiens.1000genomes.hs37d5")):

Julian Gehring. BSgenome.Hsapiens.1000genomes.hs37d5: 1000genomes Reference Genome Sequence (hs37d5). doi:10.18129/B9.bioc.BSgenome.Hsapiens.1000genomes.hs37d5, R package version 0.99.1, https://bioconductor.org/packages/BSgenome.Hsapiens.1000genomes.hs37d5.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("BSgenome.Hsapiens.1000genomes.hs37d5")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews AnnotationData, BSgenome, Genetics, Homo_sapiens
Version0.99.1
In Bioconductor sinceBioC 3.1 (R-3.2) (11.5 years)
License Artistic-2.0
Depends BSgenome (>= 1.34.0)
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me RESOLVE
Suggests Me FRASER, motifbreakR, mSigSpectra, MungeSumstats, SomaticSignatures, SparseSignatures, VariantFiltering
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Hsapiens.1000genomes.hs37d5_0.99.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Hsapiens.1000genomes.hs37d5/
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