BSgenome.Hsapiens.1000genomes.hs37d5

This is the released version of BSgenome.Hsapiens.1000genomes.hs37d5; for the devel version, see BSgenome.Hsapiens.1000genomes.hs37d5.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1

1000genomes Reference Genome Sequence (hs37d5)

Bioconductor version: Release (3.23)

1000genomes Phase2 Reference Genome Sequence (hs37d5), based on NCBI GRCh37.

Author: Julian Gehring

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("BSgenome.Hsapiens.1000genomes.hs37d5")):

Julian Gehring. BSgenome.Hsapiens.1000genomes.hs37d5: 1000genomes Reference Genome Sequence (hs37d5). doi:10.18129/B9.bioc.BSgenome.Hsapiens.1000genomes.hs37d5, R package version 0.99.1, https://bioconductor.org/packages/BSgenome.Hsapiens.1000genomes.hs37d5.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Hsapiens.1000genomes.hs37d5")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	AnnotationData, BSgenome, Genetics, Homo_sapiens
Version	0.99.1
In Bioconductor since	BioC 3.1 (R-3.2) (11.5 years)
License	Artistic-2.0
Depends	BSgenome (>= 1.34.0)
Imports
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me
Imports Me	RESOLVE
Suggests Me	FRASER, motifbreakR, mSigSpectra, MungeSumstats, SomaticSignatures, SparseSignatures, VariantFiltering
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BSgenome.Hsapiens.1000genomes.hs37d5_0.99.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url	https://bioconductor.org/packages/BSgenome.Hsapiens.1000genomes.hs37d5/
Package Downloads Report	Download Stats