BSgenome.Ggallus.UCSC.galGal3
This is the development version of BSgenome.Ggallus.UCSC.galGal3; for the stable release version, see BSgenome.Ggallus.UCSC.galGal3.
Full genome sequences for Gallus gallus (UCSC version galGal3)
Bioconductor version: Development (3.24)
Full genome sequences for Gallus gallus (Chicken) as provided by UCSC (galGal3, May 2006) and stored in Biostrings objects.
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("BSgenome.Ggallus.UCSC.galGal3")):The Bioconductor Dev Team. BSgenome.Ggallus.UCSC.galGal3: Full genome sequences for Gallus gallus (UCSC version galGal3). doi:10.18129/B9.bioc.BSgenome.Ggallus.UCSC.galGal3, R package version 1.4.0, https://bioconductor.org/packages/BSgenome.Ggallus.UCSC.galGal3.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("BSgenome.Ggallus.UCSC.galGal3") For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| No vignettes available | |
| Reference Manual |
Details
| biocViews | AnnotationData, BSgenome, Gallus_gallus, Genetics |
| Version | 1.4.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) or earlier (> 17 years) |
| License | Artistic-2.0 |
| Depends | BSgenome (>= 1.33.5) |
| Imports | BSgenome |
| System Requirements | |
| URL |
See More
| Suggests | GenomicFeatures |
| Linking To | |
| Enhances | |
| Depends On Me | BSgenome.Ggallus.UCSC.galGal3.masked |
| Imports Me | BSgenome.Ggallus.UCSC.galGal3.masked |
| Suggests Me | CNEr |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BSgenome.Ggallus.UCSC.galGal3_1.4.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Package Short Url | https://bioconductor.org/packages/BSgenome.Ggallus.UCSC.galGal3/ |
| Package Downloads Report | Download Stats |