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This is the development version of tidyCoverage; for the stable release version, see tidyCoverage.

Extract and aggregate genomic coverage over features of interest

Bioconductor version: Development (3.20)

`tidyCoverage` framework enables tidy manipulation of collections of genomic tracks and features using `tidySummarizedExperiment` methods. It facilitates the extraction, aggregation and visualization of genomic coverage over individual or thousands of genomic loci, relying on `CoverageExperiment` and `AggregatedCoverage` classes. This accelerates the integration of genomic track data in genomic analysis workflows.

Author: Jacques Serizay [aut, cre]

Maintainer: Jacques Serizay <jacquesserizay at>

Citation (from within R, enter citation("tidyCoverage")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Introduction to tidyCoverage HTML R Script
Reference Manual PDF


biocViews Coverage, Sequencing, Software
Version 1.1.0
In Bioconductor since BioC 3.19 (R-4.4) (< 6 months)
License MIT + file LICENSE
Depends R (>= 4.3.0), SummarizedExperiment
Imports S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BiocParallel, BiocIO, rtracklayer, methods, tidyr, dplyr, fansi, pillar, rlang, cli, purrr, vctrs, stats
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Suggests tidySummarizedExperiment, plyranges, ggplot2, TxDb.Hsapiens.UCSC.hg19.knownGene, AnnotationHub, GenomicFeatures, BiocStyle, hues, knitr, rmarkdown, sessioninfo, testthat (>= 3.0.0)
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Follow Installation instructions to use this package in your R session.

Source Package tidyCoverage_1.1.0.tar.gz
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macOS Binary (x86_64) tidyCoverage_1.1.0.tgz
macOS Binary (arm64) tidyCoverage_1.1.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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