tRNA
This is the development version of tRNA; for the stable release version, see tRNA.
All Bioconductor versions of tRNA
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8
Analyzing tRNA sequences and structures
Bioconductor version: 3.24 · Package version: 1.31.0
The tRNA package allows tRNA sequences and structures to be accessed and used for subsetting. In addition, it provides visualization tools to compare feature parameters of multiple tRNA sets and correlate them to additional data. The tRNA package uses GRanges objects as inputs requiring only few additional column data sets.
Author: Felix GM Ernst [aut, cre] 
Maintainer: Felix GM Ernst <felix.gm.ernst at outlook.com>
Citation
From within R, enter citation("tRNA"):
Felix GM Ernst. tRNA: Analyzing tRNA sequences and structures. doi:10.18129/B9.bioc.tRNA, R package version 1.31.0, https://bioconductor.org/packages/tRNA.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("tRNA")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.31.0 |
| License | GPL-3 + file LICENSE |
| Bug Reports | https://github.com/FelixErnst/tRNA/issues |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.8 (R-3.5) (7 years) |
| Downloads rank | 878 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/tRNA/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("tRNA")| Analyzing tRNA sequences and structures | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | tRNA_1.31.0.tar.gz |
| Windows binary (x86_64) | tRNA_1.31.0.zip |
| macOS binary (arm64) | tRNA_1.31.0.tgz |
| macOS binary (x86_64) | tRNA_1.31.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/tRNA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/tRNA |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.5), GenomicRanges, Structstrings
Imports: stringr, S4Vectors, methods, BiocGenerics, IRanges, XVector, Biostrings, Modstrings, ggplot2, scales
Suggests: knitr, rmarkdown, testthat, BiocStyle, tRNAscanImport
Reverse dependencies
Depends On Me (2): tRNAdbImport, tRNAscanImport