omicade4

This is the development version of omicade4; for the stable release version, see omicade4.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13

Multiple co-inertia analysis of omics datasets

Bioconductor version: Development (3.24)

This package performes multiple co-inertia analysis of omics datasets.

Author: Chen Meng, Aedin Culhane, Amin M. Gholami.

Maintainer: Chen Meng <mengchen18 at gmail.com>

Citation (from within R, enter citation("omicade4")):

Chen Meng, Aedin Culhane, Amin M. Gholami. omicade4: Multiple co-inertia analysis of omics datasets. doi:10.18129/B9.bioc.omicade4, R package version 1.53.0, https://bioconductor.org/packages/omicade4.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("omicade4")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("omicade4")

Using omicade4	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Classification, Clustering, MultipleComparison, Software
Version	1.53.0
In Bioconductor since	BioC 2.13 (R-3.0) (13 years)
License	GPL-2
Depends	R (>= 3.0.0), ade4
Imports	made4, Biobase
System Requirements
URL

Suggests	BiocStyle
Linking To
Enhances
Depends On Me
Imports Me	omicRexposome
Suggests Me	biosigner, MultiDataSet, phenomis, ropls
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	omicade4_1.53.0.tar.gz
Windows Binary (x86_64)	omicade4_1.53.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	omicade4_1.53.0.tgz
macOS Binary (sonoma-arm64)	omicade4_1.53.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/omicade4
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/omicade4
Package Short Url	https://bioconductor.org/packages/omicade4/
Package Downloads Report	Download Stats