DOI: 10.18129/B9.bioc.levi  

This is the development version of levi; for the stable release version, see levi.

Landscape Expression Visualization Interface

Bioconductor version: Development (3.19)

The tool integrates data from biological networks with transcriptomes, displaying a heatmap with surface curves to evidence the altered regions.

Author: Rafael Pilan [aut], Isabelle Silva [ctb], Agnes Takeda [ctb], Jose Rybarczyk Filho [ctb, cre, ths]

Maintainer: Jose Luiz Rybarczyk Filho <jose.luiz at unesp.br>

Citation (from within R, enter citation("levi")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script Using levi
PDF   Reference Manual
Text   NEWS


biocViews GeneExpression, Network, Sequencing, Software
Version 1.21.0
In Bioconductor since BioC 3.8 (R-3.5) (5 years)
License GPL (>= 2)
Imports DT (>= 0.4), RColorBrewer (>= 1.1-2), colorspace (>= 1.3-2), dplyr (>= 0.7.4), ggplot2 (>= 2.2.1), httr (>= 1.3.1), igraph (>= 1.2.1), reshape2 (>= 1.4.3), shiny (>= 1.0.5), shinydashboard (>= 0.7.0), shinyjs (>= 1.0), xml2 (>= 1.2.0), knitr, Rcpp (>= 0.12.18), grid, grDevices, stats, utils, testthat, methods, rmarkdown
LinkingTo Rcpp
Suggests rmarkdown, BiocStyle
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package levi_1.21.0.tar.gz
Windows Binary levi_1.21.0.zip (64-bit only)
macOS Binary (x86_64) levi_1.21.0.tgz
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/levi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/levi
Bioc Package Browser https://code.bioconductor.org/browse/levi/
Package Short Url https://bioconductor.org/packages/levi/
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