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This is the development version of igvShiny; to use it, please install the devel version of Bioconductor.

igvShiny: a wrapper of Integrative Genomics Viewer (IGV - an interactive tool for visualization and exploration integrated genomic data)

Bioconductor version: Development (3.19)

This package is a wrapper of Integrative Genomics Viewer (IGV). It comprises an htmlwidget version of IGV. It can be used as a module in Shiny apps.

Author: Paul Shannon [aut], Arkadiusz Gladki [aut, cre] , Karolina Scigocka [aut]

Maintainer: Arkadiusz Gladki <gladki.arkadiusz at>

Citation (from within R, enter citation("igvShiny")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews Coverage, Sequencing, ShinyApps, Software
Version 0.99.5
In Bioconductor since BioC 3.19 (R-4.4)
License MIT + file LICENSE
Depends GenomicRanges, methods, shiny
Imports BiocGenerics, checkmate, futile.logger, GenomeInfoDbData, htmlwidgets, httr, jsonlite, randomcoloR, RCurl, utils
System Requirements
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Suggests BiocStyle, GenomicAlignments, knitr, Rsamtools, rtracklayer, RUnit, shinytest2, VariantAnnotation
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Follow Installation instructions to use this package in your R session.

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