DOI: 10.18129/B9.bioc.genomeIntervals    

This is the development version of genomeIntervals; for the stable release version, see genomeIntervals.

Operations on genomic intervals

Bioconductor version: Development (3.9)

This package defines classes for representing genomic intervals and provides functions and methods for working with these. Note: The package provides the basic infrastructure for and is enhanced by the package 'girafe'.

Author: Julien Gagneur <gagneur at>, Joern Toedling, Richard Bourgon, Nicolas Delhomme

Maintainer: Julien Gagneur <gagneur at>

Citation (from within R, enter citation("genomeIntervals")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("genomeIntervals", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script Overview of the genomeIntervals package.
PDF   Reference Manual
Text   NEWS


biocViews DataImport, Genetics, Infrastructure, Software
Version 1.39.0
In Bioconductor since BioC 2.4 (R-2.9) (10 years)
License Artistic-2.0
Depends R (>= 2.15.0), methods, intervals (>= 0.14.0), BiocGenerics(>= 0.15.2)
Imports GenomeInfoDb(>= 1.5.8), GenomicRanges(>= 1.21.16), IRanges(>= 2.3.14), S4Vectors(>= 0.7.10)
Depends On Me girafe
Imports Me easyRNASeq
Suggests Me
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package genomeIntervals_1.39.0.tar.gz
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Mac OS X 10.11 (El Capitan) genomeIntervals_1.39.0.tgz
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