Registration Open for Bioc2024 July 24-26


This is the development version of ecolitk; for the stable release version, see ecolitk.

Meta-data and tools for E. coli

Bioconductor version: Development (3.20)

Meta-data and tools to work with E. coli. The tools are mostly plotting functions to work with circular genomes. They can used with other genomes/plasmids.

Author: Laurent Gautier

Maintainer: Laurent Gautier <lgautier at>

Citation (from within R, enter citation("ecolitk")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

ecolitk PDF R Script
Reference Manual PDF


biocViews Annotation, Software, Visualization
Version 1.77.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 19 years)
License GPL (>= 2)
Depends R (>= 2.10)
Imports Biobase, graphics, methods
System Requirements
See More
Suggests ecoliLeucine, ecolicdf, graph, multtest, affy
Linking To
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ecolitk_1.77.0.tar.gz
Windows Binary (64-bit only)
macOS Binary (x86_64) ecolitk_1.77.0.tgz
macOS Binary (arm64) ecolitk_1.77.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Bioc Package Browser
Package Short Url
Package Downloads Report Download Stats