PepsNMR
This is the development version of PepsNMR; for the stable release version, see PepsNMR.
Pre-process 1H-NMR FID signals
Bioconductor version: Development (3.20)
This package provides R functions for common pre-procssing steps that are applied on 1H-NMR data. It also provides a function to read the FID signals directly in the Bruker format.
Author: Manon Martin [aut, cre], Bernadette Govaerts [aut, ths], BenoƮt Legat [aut], Paul H.C. Eilers [aut], Pascal de Tullio [dtc], Bruno Boulanger [ctb], Julien Vanwinsberghe [ctb]
Maintainer: Manon Martin <manon.martin at uclouvain.be>
citation("PepsNMR")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("PepsNMR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("PepsNMR")
Application of PepsNMR on the Human Serum dataset | HTML | R Script |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | DataImport, Metabolomics, Preprocessing, Software, Visualization |
Version | 1.23.0 |
In Bioconductor since | BioC 3.8 (R-3.5) (6 years) |
License | GPL-2 | file LICENSE |
Depends | R (>= 3.6) |
Imports | Matrix, ptw, ggplot2, gridExtra, matrixStats, reshape2, methods, graphics, stats |
System Requirements | |
URL | https://github.com/ManonMartin/PepsNMR |
Bug Reports | https://github.com/ManonMartin/PepsNMR/issues |
See More
Suggests | knitr, markdown, rmarkdown, BiocStyle, PepsNMRData |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | ASICS |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | PepsNMR_1.23.0.tar.gz |
Windows Binary (x86_64) | PepsNMR_1.23.0.zip |
macOS Binary (x86_64) | PepsNMR_1.23.0.tgz |
macOS Binary (arm64) | PepsNMR_1.23.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/PepsNMR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/PepsNMR |
Bioc Package Browser | https://code.bioconductor.org/browse/PepsNMR/ |
Package Short Url | https://bioconductor.org/packages/PepsNMR/ |
Package Downloads Report | Download Stats |