DOI: 10.18129/B9.bioc.GSReg    

This is the development version of GSReg; for the stable release version, see GSReg.

Gene Set Regulation (GS-Reg)

Bioconductor version: Development (3.9)

A package for gene set analysis based on the variability of expressions as well as a method to detect Alternative Splicing Events . It implements DIfferential RAnk Conservation (DIRAC) and gene set Expression Variation Analysis (EVA) methods. For detecting Differentially Spliced genes, it provides an implementation of the Spliced-EVA (SEVA).

Author: Bahman Afsari <bahman at>, Elana J. Fertig <ejfertig at>

Maintainer: Bahman Afsari <bahman at>, Elana J. Fertig <ejfertig at>

Citation (from within R, enter citation("GSReg")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("GSReg", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script Working with the GSReg package
PDF   Reference Manual


biocViews AlternativeSplicing, GeneExpression, GeneRegulation, GeneSetEnrichment, GeneticVariability, Pathways, Software
Version 1.17.0
In Bioconductor since BioC 3.0 (R-3.1) (4.5 years)
License GPL-2
Depends R (>= 2.13.1), Homo.sapiens,, GenomicFeatures, AnnotationDbi
Suggests GenomicRanges, GSBenchMark
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GSReg_1.17.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan) GSReg_1.17.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Package Short Url
Package Downloads Report Download Stats

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