GCPtools
This is the development version of GCPtools; for the stable release version, see GCPtools.
All Bioconductor versions of GCPtools
3.24 (devel), 3.23 (release), 3.22
Tools for working with gcloud and gsutil
Bioconductor version: 3.24 · Package version: 1.3.2
Lower-level functionality to interface with Google Cloud Platform tools. 'gcloud' and 'gsutil' are both supported. The functionality provided centers around utilities for the AnVIL platform.
Author: Marcel Ramos [aut, cre] 
, Nitesh Turaga [aut], Martin Morgan [aut]
Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>
Citation
From within R, enter citation("GCPtools"):
Marcel Ramos, Nitesh Turaga, Martin Morgan. GCPtools: Tools for working with gcloud and gsutil. doi:10.18129/B9.bioc.GCPtools, R package version 1.3.2, https://bioconductor.org/packages/GCPtools.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("GCPtools")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.3.2 |
| License | Artistic-2.0 |
| URL | https://github.com/Bioconductor/GCPtools |
| Bug Reports | https://github.com/Bioconductor/GCPtools/issues |
| System Requirements | gsutil, gcloud |
| Last updated | 2026-05-22 |
| In Bioconductor since | BioC 3.22 (R-4.5) (less than a year) |
| Downloads rank | 1326 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataImport, Infrastructure, Software, ThirdPartyClient |
| Package Short Url | https://bioconductor.org/packages/GCPtools/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GCPtools")| GCPtools | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | GCPtools_1.3.2.tar.gz |
| Windows binary (x86_64) | GCPtools_1.3.2.zip |
| macOS binary (arm64) | GCPtools_1.3.2.tgz |
| macOS binary (x86_64) | GCPtools_1.3.2.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/GCPtools |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GCPtools |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 4.5.0)
Imports: AnVILBase, BiocBaseUtils, dplyr, httr, rlang, tibble, tidyr, utils
Suggests: BiocStyle, knitr, rmarkdown, testthat (>= 3.0.0)
Reverse dependencies
Imports Me (3): AnVIL, AnVILGCP, AnVILWorkflow
Suggests Me (3): AnVILBase, AnVILPublish, terraTCGAdata