CCPlotR
Plots For Visualising Cell-Cell Interactions
Bioconductor version: 3.24 · Package version: 1.11.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
CCPlotR is an R package for visualising results from tools that predict cell-cell interactions from single-cell RNA-seq data. These plots are generic and can be used to visualise results from multiple tools such as Liana, CellPhoneDB, NATMI etc.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CCPlotR")Details
| Maintainer | Sarah Ennis <ennissarah94@gmail.com> |
| Author | Sarah Ennis [aut, cre] (ORCID: <https://orcid.org/0000-0001-6100-8573>), Pilib Ó Broin [aut], Eva Szegezdi [aut] |
| License | MIT + file LICENSE |
| URL | https://github.com/Sarah145/CCPlotR |
| Bug Reports | https://github.com/Sarah145/CCPlotR/issues |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | CellBiology, Network, SingleCell, Software, SystemsBiology, Visualization |
| Package Short Url | https://bioconductor.org/packages/CCPlotR/ |
Citation
From within R, enter citation("CCPlotR"):
Sarah Ennis, Pilib Ó Broin, Eva Szegezdi. CCPlotR: Plots For Visualising Cell-Cell Interactions. doi:10.18129/B9.bioc.CCPlotR, R package version 1.11.0, https://bioconductor.org/packages/CCPlotR.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | CCPlotR_1.11.0.tar.gz |
| Windows binary (x86_64) | CCPlotR_1.11.0.zip |
| macOS binary (arm64) | CCPlotR_1.11.0.tgz |
| macOS binary (x86_64) | CCPlotR_1.11.0.tgz |