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cycle

This is the released version of cycle; for the devel version, see cycle.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Significance of periodic expression pattern in time-series data


Bioconductor version: Release (3.23)

Package for assessing the statistical significance of periodic expression based on Fourier analysis and comparison with data generated by different background models

Author: Matthias Futschik <mfutschik at ualg.pt>

Maintainer: Matthias Futschik <mfutschik at ualg.pt>

Citation (from within R, enter citation("cycle")):

Matthias Futschik. cycle: Significance of periodic expression pattern in time-series data. doi:10.18129/B9.bioc.cycle, R package version 1.66.0, https://bioconductor.org/packages/cycle.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("cycle")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cycle")
Introduction to cycle PDF R Script
Reference ManualPDF

Details

biocViews Microarray, Software, TimeCourse
Version1.66.0
In Bioconductor sinceBioC 2.5 (R-2.10) (17 years)
License GPL-2
Depends R (>= 2.10.0), Mfuzz
Imports Biobase, stats
System Requirements
URLhttp://cycle.sysbiolab.eu
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package cycle_1.66.0.tar.gz
Windows Binary (x86_64) cycle_1.66.0.zip
macOS Binary (big-sur-x86_64) cycle_1.66.0.tgz
macOS Binary (sonoma-arm64) cycle_1.66.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/cycle
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/cycle
Package Short Url https://bioconductor.org/packages/cycle/
Package Downloads ReportDownload Stats