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RBPEqBind

This is the development version of RBPEqBind; to use it, please install the devel version of Bioconductor.

RNA-Binding Protein Competitive Binding Simulation

DOI: 10.18129/B9.bioc.RBPEqBind

Bioconductor version: Development (3.24)

Simulates competitive binding of N RBPs to RNA sequences using an equilibrium binding model. Supports single sequences, concentration grids, and transcriptome-wide analysis. Designed for Bioconductor.

Author: Soon Yi [aut, cre] ORCID: 0000-0002-4535-6532 , National Institutes of Health [fnd] (T32 GM152319)

Maintainer: Soon Yi <cu.soonyi at gmail.com>

Citation (from within R, enter citation("RBPEqBind")):

Soon Yi. RBPEqBind: RNA-Binding Protein Competitive Binding Simulation. doi:10.18129/B9.bioc.RBPEqBind, R package version 0.99.4, https://bioconductor.org/packages/RBPEqBind.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("RBPEqBind")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RBPEqBind")

Details

Package Archives

Follow Installation instructions to use this package in your R session.