MafDb.ExAC.r1.0.nonTCGA.GRCh38
This is the released version of MafDb.ExAC.r1.0.nonTCGA.GRCh38; for the devel version, see MafDb.ExAC.r1.0.nonTCGA.GRCh38.
Minor allele frequency data from ExAC release 1.0 subset of nonTCGA exomes for GRCh38
Bioconductor version: Release (3.23)
Store minor allele frequency data from the Exome Aggregation Consortium (ExAC release 1.0 subset of nonTCGA exomes) for the human genome version GRCh38.
Author: Robert Castelo
Maintainer: Robert Castelo <robert.castelo at upf.edu>
citation("MafDb.ExAC.r1.0.nonTCGA.GRCh38")):Robert Castelo. MafDb.ExAC.r1.0.nonTCGA.GRCh38: Minor allele frequency data from ExAC release 1.0 subset of nonTCGA exomes for GRCh38. doi:10.18129/B9.bioc.MafDb.ExAC.r1.0.nonTCGA.GRCh38, R package version 3.10.0, https://bioconductor.org/packages/MafDb.ExAC.r1.0.nonTCGA.GRCh38.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MafDb.ExAC.r1.0.nonTCGA.GRCh38") For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| No vignettes available | |
| Reference Manual |
Details
| biocViews | AnnotationData, Genetics, GenomicScores, Homo_sapiens |
| Version | 3.10.0 |
| In Bioconductor since | BioC 3.7 (R-3.5) (8.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.5.0), GenomicScores (>= 1.9.6) |
| Imports | utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome |
| System Requirements | |
| URL |
See More
| Suggests | SNPlocs.Hsapiens.dbSNP149.GRCh38 |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MafDb.ExAC.r1.0.nonTCGA.GRCh38_3.10.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Package Short Url | https://bioconductor.org/packages/MafDb.ExAC.r1.0.nonTCGA.GRCh38/ |
| Package Downloads Report | Download Stats |