GSE280465
This is the development version of GSE280465; to use it, please install the devel version of Bioconductor.
GSE280465 EPICv2 Methylation ExperimentHub Data
Bioconductor version: Development (3.24)
Provides ExperimentHub access to a processed DNA methylation resource derived from GEO accession GSE280465. The resource contains adult Illumina Infinium MethylationEPIC version 2 data from 163 samples across four tissue types, represented as a RangedSummarizedExperiment with beta, M, and CN assays, hg38 genomic ranges, and sample phenotype metadata.
Author: Paul Ruiz Pinto [aut, cre]
Maintainer: Paul Ruiz Pinto <ruizpint at qut.edu.au>
citation("GSE280465")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("GSE280465")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GSE280465")| GSE280465 EPICv2 methylation data | HTML | R Script |
| Reference Manual |
Details
| biocViews | ExperimentData, ExperimentHub, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData, Tissue |
| Version | 0.99.0 |
| License | Artistic-2.0 |
| Depends | R (>= 4.4.0) |
| Imports | ExperimentHub, utils |
| System Requirements | |
| URL | https://github.com/paulYRP/GSE280465 |
| Bug Reports | https://github.com/paulYRP/GSE280465/issues |
See More
| Suggests | BiocStyle, ExperimentHubData, knitr, rmarkdown, SummarizedExperiment |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | GSE280465_0.99.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/GSE280465 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GSE280465 |
| Package Short Url | https://bioconductor.org/packages/GSE280465/ |
| Package Downloads Report | Download Stats |