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CLAMPData

This is the development version of CLAMPData; to use it, please install the devel version of Bioconductor.

Experiment data for CLAMP package


Bioconductor version: Development (3.24)

Curated CLAMP resources (latent variables, loadings, priors, and example matrices) for use with the CLAMP package, distributed via ExperimentHub.

Author: Marc Subirana-Granés [aut, cre] ORCID iD ORCID: 0000-0003-3934-839X

Maintainer: Marc Subirana-Granés <mb2subi at gmail.com>

Citation (from within R, enter citation("CLAMPData")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("CLAMPData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CLAMPData")
Accessing CLAMPData ExperimentHub resources HTML R Script
Reference Manual PDF

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, RNASeqData
Version 0.99.5
License MIT + file LICENSE
Depends R (>= 4.6.0)
Imports ExperimentHub, utils
System Requirements
URL https://github.com/pivlab/CLAMPData
Bug Reports https://github.com/pivlab/CLAMPData/issues
See More
Suggests ExperimentHubData, knitr, rmarkdown, BiocStyle, rhdf5, testthat (>= 3.0.0)
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package CLAMPData_0.99.5.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository git clone https://git.bioconductor.org/packages/CLAMPData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/CLAMPData
Package Short Url https://bioconductor.org/packages/CLAMPData/
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