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BiocAzul

This is the released version of BiocAzul; for the devel version, see BiocAzul.

All versions 3.24 (devel), 3.23 (release)

Programmatic Access to the Azul API


Bioconductor version: Release (3.23)

Represents the OpenAPI v2 Azul API as an R object for performing requests. The infrastructure uses the AnVIL and rapiclient packages. Users can connect to either the AnVIL or Human Cell Atlas Data Explorers.

Author: Marcel Ramos [aut, cre] ORCID iD ORCID: 0000-0002-3242-0582 , NHGRI AnVIL Project [fnd] (GrantNo.: U24HG010263)

Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>

Citation (from within R, enter citation("BiocAzul")):

Marcel Ramos. BiocAzul: Programmatic Access to the Azul API. doi:10.18129/B9.bioc.BiocAzul, R package version 1.0.3, https://bioconductor.org/packages/BiocAzul.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BiocAzul")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocAzul")
Introduction to the BiocAzul package HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews DataImport, Infrastructure, Software, ThirdPartyClient
Version1.0.3
In Bioconductor sinceBioC 3.23 (R-4.6) (< 6 months)
License Artistic-2.0
Depends R (>= 4.5.0), AnVIL
Imports AnVILPublish (>= 1.21.1), dplyr, httr, jsonlite, progress, rlang, methods, tidyr
System Requirements
URLhttps://github.com/Bioconductor/BiocAzul
Bug Reportshttps://github.com/Bioconductor/BiocAzul/issues
See More
Suggests BiocStyle, knitr, rmarkdown, tinytest
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BiocAzul_1.0.3.tar.gz
Windows Binary (x86_64) BiocAzul_1.0.3.zip
macOS Binary (big-sur-x86_64) BiocAzul_1.0.3.tgz
macOS Binary (sonoma-arm64) BiocAzul_1.0.3.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/BiocAzul
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/BiocAzul
Package Short Url https://bioconductor.org/packages/BiocAzul/
Package Downloads ReportDownload Stats