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BeadArrayUseCases

This is the released version of BeadArrayUseCases; for the devel version, see BeadArrayUseCases.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9

Analysing Illumina BeadArray expression data using Bioconductor


Bioconductor version: Release (3.23)

Example data files and use cases for processing Illumina BeadArray expression data using Bioconductor

Author: Mark Dunning, Wei Shi, Andy Lynch, Mike Smith, Matt Ritchie

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("BeadArrayUseCases")):

Mark Dunning, Wei Shi, Andy Lynch, Mike Smith, Matt Ritchie. BeadArrayUseCases: Analysing Illumina BeadArray expression data using Bioconductor. doi:10.18129/B9.bioc.BeadArrayUseCases, R package version 1.50.0, https://bioconductor.org/packages/BeadArrayUseCases.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BeadArrayUseCases")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BeadArrayUseCases")
BeadArrayUseCases.pdf PDF R Script
Reference ManualPDF

Details

biocViews ExperimentData, MicroarrayData
Version1.50.0
In Bioconductor sinceBioC 2.9 (R-2.14) (15 years)
License GPL-2
Depends
Imports beadarray (>= 2.3.18), limma, GEOquery
System Requirements
URL
See More
Suggests Biostrings, GenomicRanges, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv3.db
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BeadArrayUseCases_1.50.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/BeadArrayUseCases
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/BeadArrayUseCases
Package Short Url https://bioconductor.org/packages/BeadArrayUseCases/
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