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Recent Commits

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Newest Packages

Software Packages

HistoImagePlot	Plotting functionality for Histopathology pipeline datasets
imageFeatureTCGA	Import features from hovernet, provgigapath into a MultiAssayExperiment
scToppR	API Wrapper for ToppGene
CrcBiomeScreen	An R package for colorectal cancer screening and microbiome analysis
postNet	Post-transcriptional network modeling
scECODA	Single-Cell Exploratory Compositional Data Analysis
VISTA	Visualization and Integrated System for Transcriptomic Analysis
imageTCGAutils	Utility functions for working with histopathology images
fastRanges	Deterministic Multithreaded Genomic Interval Operations
PlinkMatrix	DelayedArray interface for plink bed files

Experiment Data Packages

HumanRetinaLRSData	Long-read RNA-seq gene count data from human retinal organoids
DMRsegaldata	Example DNAm Data for DMRsegal
curatedCRCData	Colorectal Cancer Gene Expression Analysis
EMTscoreData	Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)
MutSeqRData	Experimental Data for MutSeqR Examples
dominatRData	Datasets for R Package dominatR
DoReMiTra	Orchestrating Blood Radiation Transcriptomic Data
nmrdata	Example 1d NMR Data for Metabolic Profiling
ChIPDBData	ChIP-seq Target Databases for TFEA.ChIP
iModMixData	Data for iModMix Package

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Single Package Builder

All Current Submissions

Recent Submissions

myorgdbb

CycleMix

GSEAlens

pgen2gds

Fancy

friends.test

Fishash

karioCaS

ProteinBatcher for proteomics downstream analysis

ctdR

scFastDE

growkar

microscapeR: Downstream Analysis Tools for Amplicon Sequencing Data

exposomeSC

SpatialDataR

WithinHostExperiment

scBatchQC

mirBottleneck

barmixR

spectreasy

Recent Builds

BenchHub	2026-04-21T21:00:21
AnnotationGx	2026-04-21T19:04:53
AnnotationGx	2026-04-21T16:06:43
AnnotationGx	2026-04-21T15:37:58
AnnotationGx	2026-04-21T13:17:02
panoramic	2026-04-21T06:30:44
BenchHub	2026-04-21T05:39:46
wavFeatExt	2026-04-21T02:18:05
epiRomics	2026-04-20T23:11:52
AnnotationGx	2026-04-20T17:21:31
AnnotationGx	2026-04-20T11:16:19
immLynx	2026-04-19T08:04:54
splicelogic	2026-04-18T13:02:47
epiRomics	2026-04-18T07:49:30
epiRomics	2026-04-18T06:57:46
immLynx	2026-04-17T22:09:40
atacInferCnv	2026-04-17T07:41:38
VISTA	2026-04-17T04:46:31
VISTA	2026-04-17T01:48:44
dnaEPICO	2026-04-16T02:31:55

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Mirror Status

Last updated 2026-04-21T11:04:58-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	yes
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	yes	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	yes	no
https://bioconductor.unipi.it	no	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	yes	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	yes	yes

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