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Recent Commits

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Newest Packages

Software Packages

jvecfor	Fast K-Nearest Neighbor Search for Single-Cell Analysis
scPassport	Passport System for Single-Cell Objects
GenomicCoordinates	Enhanced string parsing for genomic coordinates
MetaboAnnotatoR	Automated Annotation of All-Ion Fragmentation LC-MS Metabolomic Features
SpNeigh	Spatial Neighborhood Modeling and Differential Expression Analysis for Transcriptomics
ExpoRiskR	Exposure-Aware Multi-Omics Risk Modeling
scConform	Conformal Inference for Cell Type Annotation
RNAshapeQC	RNA Coverage-Shape-Based Quality Control Metrics
MeLSI	Metric Learning for Statistical Inference in Microbiome Analysis
sfi	Data analysis for Single File Injections (SFIs) mode LC-MS analysis

Experiment Data Packages

DMRsegaldata	.
EMTscoreData	Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)
MutSeqRData	Experimental Data for MutSeqR Examples
dominatRData	Datasets for R Package dominatR
DoReMiTra	Orchestrating Blood Radiation Transcriptomic Data
nmrdata	Example 1d NMR Data for Metabolic Profiling
ChIPDBData	ChIP-seq Target Databases for TFEA.ChIP
iModMixData	Data for iModMix Package
AWAggregatorData	Attribute-Weighted Aggregation Data
CENTREprecomputed	Hub package for the precomputed data of CENTRE and example data

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Single Package Builder

All Current Submissions

Recent Submissions

ProteinBatcher for proteomics downstream analysis

ctdR

scFastDE

growkar

microscapeR: Downstream Analysis Tools for Amplicon Sequencing Data

exposomeSC

SpatialDataR

WithinHostExperiment

scBatchQC

mirBottleneck

barmixR

spectreasy

parkinsonsMetagenomicData

splicelogic

mesa

gutenTAG

New package: AnnotatedBCGEData - Annotated Breast Cancer Gene Expression Data

CONCERTDR

New package submission: LRDE - differential expression analysis for long-read RNA-Seq

PinPath

Recent Builds

SpatialArtifacts	2026-04-03T16:12:07
immLynx	2026-04-03T16:01:29
RankMap	2026-04-03T08:50:00
ZarrArray	2026-04-03T06:20:35
SpatialArtifacts	2026-04-02T15:50:11
DMRsegaldata	2026-04-02T15:45:45
SpatialArtifacts	2026-04-02T15:37:26
SpatialArtifacts	2026-04-02T15:16:51
jvecfor	2026-04-02T14:54:48
scPassport	2026-04-02T11:08:43
spectreasy	2026-04-02T10:17:41
wavFeatExt	2026-04-02T08:20:59
dnaEPICO	2026-04-02T05:16:06
phylobar	2026-04-01T10:07:53
VISTA	2026-04-01T06:34:00
VISTA	2026-04-01T03:21:45
PlinkMatrix	2026-03-31T22:59:25
HumanRetinaLRSData	2026-03-31T21:56:23
BiocAzul	2026-03-31T21:39:46
LRDE	2026-03-31T20:36:13

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Mirror Status

Last updated 2026-04-03T19:04:34-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	yes
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	yes	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	yes	no
https://bioconductor.unipi.it	no	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	yes	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	yes	yes

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