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Recent Commits

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Newest Packages

Software Packages

HiSpaR	Hierarchical Inference of Spatial Positions from Hi-C Data
BiocBuildReporter	Functions to process a bioconductor build report database
SMTrackR	SMTrackR: a R/Bioconductor package for mapping protein binding at individual DNA molecules
SEMPLR	SNP Effect Matrix Pipeline in R
MetaProViz	METabolomics pre-PRocessing, functiOnal analysis and VIZualisation
fRagmentomics	Extract Fragmentomics Features and Mutational Status
fourSynergy	Ensemble algorithm for 4C-seq data
netZooR	A menagerie of methods for the inference and analysis of gene regulatory networks
GOfan	Sunburst Plot for Enriched Gene Ontology Terms
Battlefield	Swiss-army toolkit for selecting niche fronts and invasive margins in spatial transcriptomics data

Experiment Data Packages

EMTscoreData	Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)
MutSeqRData	Experimental Data for MutSeqR Examples
dominatRData	Datasets for R Package dominatR
DoReMiTra	Orchestrating Blood Radiation Transcriptomic Data
nmrdata	Example 1d NMR Data for Metabolic Profiling
ChIPDBData	ChIP-seq Target Databases for TFEA.ChIP
iModMixData	Data for iModMix Package
AWAggregatorData	Attribute-Weighted Aggregation Data
CENTREprecomputed	Hub package for the precomputed data of CENTRE and example data
muSpaData	Multi-sample multi-group spatially resolved transcriptomic data

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Single Package Builder

All Current Submissions

Recent Submissions

parkinsonsMetagenomicData

splicelogic

mesa

gutenTAG

New package: AnnotatedBCGEData - Annotated Breast Cancer Gene Expression Data

CONCERTDR

mirBottleneck

New package submission: LRDE - differential expression analysis for long-read RNA-Seq

PinPath

seuratPassport

BiocAzul

GraphExperiment

betterChromVAR

ontoProc2: access to OBO ontologies via Semantic SQL

IdentifiHR

Orchestrating Microbiome Analysis (OMA) book

PlinkMatrix: DelayedArray interface to plink genotypes

Package submission: hcocena

epiRomics - a multi-omics R package to identify and visualize enhancers

S4Cartographer

Recent Builds

DMRsegaldata	2026-03-20T17:21:24
DMRsegaldata	2026-03-20T17:12:31
DMRsegaldata	2026-03-20T17:07:28
DMRsegaldata	2026-03-20T17:02:25
DMRsegaldata	2026-03-20T16:55:28
DMRsegaldata	2026-03-20T16:44:47
cellNexus	2026-03-20T10:50:01
imageTCGAutils	2026-03-20T09:59:29
scECODA	2026-03-20T09:20:02
imageFeatureTCGA	2026-03-19T21:12:07
imageFeatureTCGA	2026-03-19T20:05:07
imageTCGAutils	2026-03-19T17:04:18
BiocPkgDash	2026-03-19T15:01:46
scECODA	2026-03-19T14:14:07
cellNexus	2026-03-19T06:07:17
imageFeatureTCGA	2026-03-18T17:52:36
sfi	2026-03-18T13:43:06
MetaboAnnotatoR	2026-03-18T13:36:04
BamScale	2026-03-18T11:38:50
queeems	2026-03-18T08:44:31

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Mirror Status

Last updated 2026-03-20T05:04:32-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	yes
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	yes	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	yes	no
https://bioconductor.unipi.it	no	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	yes	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	yes	yes

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