DOI: 10.18129/B9.bioc.qcmetrics    

A Framework for Quality Control

Bioconductor version: Release (3.7)

The package provides a framework for generic quality control of data. It permits to create, manage and visualise individual or sets of quality control metrics and generate quality control reports in various formats.

Author: Laurent Gatto [aut, cre]

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>

Citation (from within R, enter citation("qcmetrics")):


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HTML R Script Index file for the qcmetrics package vignette
PDF R Script The 'qcmetrics' infrastructure for quality control and reporting
PDF   Reference Manual
Text   NEWS


biocViews MassSpectrometry, Microarray, Proteomics, QualityControl, ReportWriting, Software, Visualization
Version 1.18.0
In Bioconductor since BioC 2.13 (R-3.0) (4.5 years)
License GPL-2
Depends R (>= 3.3)
Imports Biobase, methods, knitr, tools, Nozzle.R1, xtable, pander, S4Vectors
Suggests affy, MSnbase, ggplot2, lattice, yaqcaffy, MAQCsubsetAFX, RforProteomics, AnnotationDbi, mzR, hgu133plus2cdf, BiocStyle
URL https://github.com/lgatto/qcmetrics
BugReports https://github.com/lgatto/qcmetrics/issues
Depends On Me
Imports Me MSstatsQC
Suggests Me
Build Report  

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Source Package qcmetrics_1.18.0.tar.gz
Windows Binary qcmetrics_1.18.0.zip
Mac OS X 10.11 (El Capitan) qcmetrics_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/qcmetrics
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/qcmetrics
Package Short Url http://bioconductor.org/packages/qcmetrics/
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