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Parallel queries distributed by file or by range

Bioconductor version: Release (2.14)

This package provides infrastructure for parallel queries distributed 'by file' or 'by range'. User defined map and reduce functions provide added flexibility for data combination and manipulation.

Author: Valerie Obenchain, Michael Love, Martin Morgan

Maintainer: Bioconductor Package Maintainer <maintainer at>

Citation (from within R, enter citation("GenomicFiles")):


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PDF R Script Introduction to GenomicFiles
PDF   Reference Manual
Text   NEWS


biocViews DataImport, Infrastructure, Software
Version 1.0.1
In Bioconductor since BioC 2.14 (R-3.1)
License Artistic-2.0
Depends R (>= 3.1.0), methods, BiocGenerics, BiocParallel, Rsamtools, rtracklayer(>= 1.23.16)
Imports GenomicAlignments
Suggests genefilter, deepSNV, BiocStyle, IRanges, RUnit, RNAseqData.HNRNPC.bam.chr14, TxDb.Hsapiens.UCSC.hg19.knownGene
System Requirements
Depends On Me
Imports Me
Suggests Me

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Package Source GenomicFiles_1.0.1.tar.gz
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