To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ldblock")

In most cases, you don't need to download the package archive at all.

ldblock

DOI: 10.18129/B9.bioc.ldblock    

data structures for linkage disequilibrium measures in populations

Bioconductor version: Release (3.6)

Define data structures for linkage disequilibrium measures in populations.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("ldblock")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ldblock")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ldblock")

 

PDF R Script LD block import and manipulation
PDF   Reference Manual
Text   NEWS

Details

biocViews Software
Version 1.8.0
In Bioconductor since BioC 3.2 (R-3.2) (2 years)
License Artistic-2.0
Depends R (>= 3.1), methods, Homo.sapiens
Imports Matrix, snpStats, erma, VariantAnnotation, GenomeInfoDb, Rsamtools, GO.db, GenomicFiles(>= 1.13.6)
LinkingTo
Suggests RUnit, BiocGenerics, knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me gQTLstats
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ldblock_1.8.0.tar.gz
Windows Binary ldblock_1.8.0.zip
Mac OS X 10.11 (El Capitan) ldblock_1.8.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ldblock
Package Short Url http://bioconductor.org/packages/ldblock/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: