To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("chipenrich.data")

In most cases, you don't need to download the package archive at all.

chipenrich.data

 

   

This is the development version of chipenrich.data; for the stable release version, see chipenrich.data.

Gene set enrichment analysis for ChIP-seq data

Bioconductor version: Development (3.5)

Supporting data for the chipenrich package. Includes pre-defined gene sets, gene locus definitions, and mappability estimates.

Author: Ryan P. Welch [aut, cph], Chee Lee [aut], Raymond G. Cavalcante [aut, cre], Laura J. Scott [ths], Maureen A. Sartor [ths]

Maintainer: Ryan P. Welch <welchr at umich.edu>, Chee Lee <cheelee at umich.edu>, Raymond G. Cavalcante <rcavalca at umich.edu>

Citation (from within R, enter citation("chipenrich.data")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("chipenrich.data")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews ChIPSeqData, ExperimentData, Genome
Version 1.11.1
License GPL-3
Depends R (>= 3.1.0)
Imports methods, GenomicRanges, IRanges, BiocGenerics
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me chipenrich
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source chipenrich.data_1.11.1.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/chipenrich.data/
Package Downloads Report Download Stats

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