chipenrich.data

Gene set enrichment analysis for ChIP-seq data

Bioconductor version: Release (2.14)

Supporting data for the chipenrich package. Includes pre-defined gene sets, gene locus definitions, and mappability estimates.

Author: Ryan P. Welch [aut, cre, cph], Chee Lee [aut], Laura J. Scott [ths], Maureen A. Sartor [ths]

Maintainer: Ryan P. Welch <welchr at umich.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("chipenrich.data")

To cite this package in a publication, start R and enter:

    citation("chipenrich.data")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData
Version 1.0.0
License GPL-3
Depends R (>= 2.15.0)
Imports methods, GenomicRanges(>= 1.10.0), IRanges(>= 1.16.0), BiocGenerics(>= 0.2.0)
Suggests
System Requirements
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Depends On Me
Imports Me chipenrich
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Package Downloads

Package Source chipenrich.data_1.0.0.tar.gz
Windows Binary chipenrich.data_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) chipenrich.data_1.0.0.tgz
Mac OS X 10.9 (Mavericks) chipenrich.data_1.0.0.tgz
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