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spatialSimGP

This is the released version of spatialSimGP; for the devel version, see spatialSimGP.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20

Simulate Spatial Transcriptomics Data with the Mean-variance Relationship

DOI: 10.18129/B9.bioc.spatialSimGP

Bioconductor version: Release (3.23)

This packages simulates spatial transcriptomics data with the mean- variance relationship using a Gaussian Process model per gene.

Author: Kinnary Shah [aut, cre] ORCID: 0000-0001-7098-2116 , Boyi Guo [aut] ORCID: 0000-0003-2950-2349 , Stephanie C. Hicks [aut] ORCID: 0000-0002-7858-0231

Maintainer: Kinnary Shah <kinnaryshahh at gmail.com>

Citation (from within R, enter citation("spatialSimGP")):

Kinnary Shah, Boyi Guo, Stephanie C. Hicks. spatialSimGP: Simulate Spatial Transcriptomics Data with the Mean-variance Relationship. doi:10.18129/B9.bioc.spatialSimGP, R package version 1.6.0, https://bioconductor.org/packages/spatialSimGP.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("spatialSimGP")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("spatialSimGP")

Details

Package Archives

Follow Installation instructions to use this package in your R session.