sights

This is the released version of sights; for the devel version, see sights.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4

Statistics and dIagnostic Graphs for HTS

Bioconductor version: Release (3.23)

SIGHTS is a suite of normalization methods, statistical tests, and diagnostic graphical tools for high throughput screening (HTS) assays. HTS assays use microtitre plates to screen large libraries of compounds for their biological, chemical, or biochemical activity.

Author: Elika Garg [aut, cre], Carl Murie [aut], Heydar Ensha [ctb], Robert Nadon [aut]

Maintainer: Elika Garg <elika.garg at mail.mcgill.ca>

Citation (from within R, enter citation("sights")):

Elika Garg, Carl Murie, Robert Nadon. sights: Statistics and dIagnostic Graphs for HTS. doi:10.18129/B9.bioc.sights, R package version 1.38.0, https://bioconductor.org/packages/sights.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("sights")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sights")

Using SIGHTS R-package	HTML	R Script
Reference Manual	PDF
NEWS	Text
LICENSE	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	BatchEffect, CellBasedAssays, ImmunoOncology, MicrotitrePlateAssay, MultipleComparison, Normalization, Preprocessing, QualityControl, Software, Visualization
Version	1.38.0
In Bioconductor since	BioC 3.4 (R-3.3) (10 years)
License	GPL-3 \| file LICENSE
Depends	R (>= 3.3)
Imports	MASS (>= 7.3), qvalue (>= 2.2), ggplot2 (>= 2.0), reshape2 (>= 1.4), lattice (>= 0.2), stats (>= 3.3)
System Requirements
URL	https://eg-r.github.io/sights/
Bug Reports	https://github.com/eg-r/sights/issues

Suggests	testthat, knitr, rmarkdown, ggthemes, gridExtra, xlsx
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	sights_1.38.0.tar.gz
Windows Binary (x86_64)	sights_1.38.0.zip
macOS Binary (big-sur-x86_64)	sights_1.38.0.tgz
macOS Binary (sonoma-arm64)	sights_1.38.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/sights
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/sights
Package Short Url	https://bioconductor.org/packages/sights/
Package Downloads Report	Download Stats