Bioconductor Developer Survey 2026 Now Open!

scanMiRData

miRNA Affinity models for the scanMiR package

Bioconductor version: 3.23 · Package version: 1.18.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

This package contains companion data to the scanMiR package. It contains `KdModel` (miRNA 12-mer binding affinity models) collections corresponding to all human, mouse and rat mirbase miRNAs. See the scanMiR package for details.

DOI: 10.18129/B9.bioc.scanMiRData

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("scanMiRData")

Details

MaintainerPierre-Luc Germain <pierre-luc.germain@hest.ethz.ch>
AuthorPierre-Luc Germain [cre, aut] (ORCID: <https://orcid.org/0000-0003-3418-4218>), Michael Soutschek [aut], Fridolin Gross [aut]
LicenseGPL-3
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsExperimentData, Homo_sapiens_Data, Mus_musculus_Data, Rattus_norvegicus_Data, miRNAData
Package Short Url https://bioconductor.org/packages/scanMiRData/

Citation

From within R, enter citation("scanMiRData"):

Pierre-Luc Germain, Michael Soutschek, Fridolin Gross. scanMiRData: miRNA Affinity models for the scanMiR package. doi:10.18129/B9.bioc.scanMiRData, R package version 1.18.0, https://bioconductor.org/packages/scanMiRData.

Generated from the package metadata; it may differ from the package's own citation.

Download

Follow the installation instructions to use this package in your R session.

Source packagescanMiRData_1.18.0.tar.gz
Dependencies

Depends: R (>= 4.0)

Imports: scanMiR, utils

Suggests: knitr, rmarkdown, BiocStyle

Reverse dependencies

Imports Me (1): scanMiRApp