DOI: 10.18129/B9.bioc.nullrangesData  

ExperimentHub datasets for the nullranges package

Bioconductor version: Release (3.17)

Provides datasets for the nullranges package vignette, in particular example datasets for DNase hypersensitivity sites (DHS), CTCF binding sites, and CTCF genomic interactions. These are used to demonstrate generation of null hypothesis feature sets, either through block bootstrapping or matching, in the nullranges vignette. For more details, see the data object man pages, and the R scripts for object construction provided within the package.

Author: Michael Love [aut, cre] , Wancen Mu [aut] , Eric Davis [aut] , Mikhail Dozmorov [aut]

Maintainer: Michael Love <michaelisaiahlove at>

Citation (from within R, enter citation("nullrangesData")):


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if (!require("BiocManager", quietly = TRUE))


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HTML R Script nullrangesData package
PDF   Reference Manual


biocViews ChIPSeqData, ENCODE, ExperimentData, ExperimentHub, Homo_sapiens_Data, SequencingData
Version 1.6.0
License GPL-3
Depends R (>= 4.1.0), ExperimentHub, GenomicRanges, InteractionSet
Imports utils
Suggests knitr, rmarkdown
Depends On Me
Imports Me
Suggests Me iSEEhub, nullranges
Links To Me
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Source Package nullrangesData_1.6.0.tar.gz
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