macrophage
Human macrophage immune response
Bioconductor version: 3.23 · Package version: 1.28.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
This package provides the output of running Salmon on a set of 24 RNA-seq samples from Alasoo, et al. "Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response", published in Nature Genetics, January 2018. For details on version numbers and how the samples were processed see the package vignette.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("macrophage")Details
| Maintainer | Michael Love <michaelisaiahlove@gmail.com> |
| Author | Michael Love |
| License | GPL (>= 2) |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentData, RNASeqData, SequencingData |
| Package Short Url | https://bioconductor.org/packages/macrophage/ |
Citation
From within R, enter citation("macrophage"):
Michael Love. macrophage: Human macrophage immune response. doi:10.18129/B9.bioc.macrophage, R package version 1.28.0, https://bioconductor.org/packages/macrophage.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | macrophage_1.28.0.tar.gz |
Reverse dependencies
Suggests Me (8): DeeDeeExperiment, fishpond, fluentGenomics, GeDi, GeneTonic, mosdef, quantiseqr, tximeta