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eoPredData

This is the released version of eoPredData; for the devel version, see eoPredData.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20

ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile


Bioconductor version: Release (3.23)

Provides access to eoPred pretrained model hosted on ExperimentHub. Model was trained on placental DNA methylation preeclampsia samples using mixOmics splsda. There are two resources: 1. the model object, and 2. a testing data set used to demonstrate the function.

Author: Iciar Boyano [aut], Victor Yuan [aut, cre]

Maintainer: Victor Yuan <victor.2wy at gmail.com>

Citation (from within R, enter citation("eoPredData")):

Iciar Boyano, Victor Yuan. eoPredData: ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile. doi:10.18129/B9.bioc.eoPredData, R package version 1.6.0, https://bioconductor.org/packages/eoPredData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("eoPredData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("eoPredData")
eoPredData HTML R Script
Reference ManualPDF
LICENSEText

Details

biocViews ExperimentData, ExperimentHub, GEO, Homo_sapiens_Data, MethylationArrayData, Tissue
Version1.6.0
In Bioconductor sinceBioC 3.20 (R-4.4) (2 years)
License MIT + file LICENSE
Depends ExperimentHub
Imports
System Requirements
URLhttps://github.com/wvictor14/eoPredData
Bug Reportshttps://github.com/wvictor14/eoPredData/issues
See More
Suggests BiocStyle, knitr, rmarkdown, RefManageR, planet, mixOmics
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package eoPredData_1.6.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/eoPredData
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/eoPredData
Package Short Url https://bioconductor.org/packages/eoPredData/
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