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A Curated RNA-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

Bioconductor version: Release (3.18)

A curated dataset of RNA-Seq samples. The samples are MDI-induced pre-phagocytes (3T3-L1) at different time points/stage of differentiation. The package document the data collection, pre-processing and processing. In addition to the documentation, the package contains the scripts that was used to generated the data.

Author: Mahmoud Ahmed [aut, cre]

Maintainer: Mahmoud Ahmed <mahmoud.s.fahmy at students.kasralainy.edu.eg>

Citation (from within R, enter citation("curatedAdipoRNA")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Using curatedAdipoRNA HTML R Script
Reference Manual PDF


biocViews ExperimentData, GEO, RNASeqData, SequencingData
Version 1.18.0
License GPL-3
Depends R (>= 3.6), SummarizedExperiment
System Requirements
URL https://github.com/MahShaaban/curatedAdipoRNA
Bug Reports https://github.com/MahShaaban/curatedAdipoRNA/issues
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Suggests knitr, rmarkdown, DESeq2, fastqcr, devtools, testthat, readr, dplyr, tidyr, ggplot2, S4Vectors
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Follow Installation instructions to use this package in your R session.

Source Package curatedAdipoRNA_1.18.0.tar.gz
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Source Repository git clone https://git.bioconductor.org/packages/curatedAdipoRNA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/curatedAdipoRNA
Package Short Url https://bioconductor.org/packages/curatedAdipoRNA/
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