bladderbatch
Bladder gene expression data illustrating batch effects
Bioconductor version: Release (3.19)
This package contains microarray gene expression data on 57 bladder samples from 5 batches. The data are used as an illustrative example for the sva package.
Author: Jeffrey T. Leek <jleek at jhsph.edu>
Maintainer: Jeffrey T. Leek <jleek at jhsph.edu>
Citation (from within R, enter
citation("bladderbatch")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("bladderbatch")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("bladderbatch")
bladderbatchTutorial | R Script | |
Reference Manual |
Details
biocViews | CancerData, ExperimentData, MicroarrayData |
Version | 1.42.0 |
License | Artistic-2.0 |
Depends | Biobase |
Imports | |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | RUVcorr |
Suggests Me | BatchQC, Harman, sva |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | bladderbatch_1.42.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/bladderbatch |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/bladderbatch |
Package Short Url | https://bioconductor.org/packages/bladderbatch/ |
Package Downloads Report | Download Stats |