aracne.networks
ARACNe-inferred gene networks from TCGA tumor datasets
Bioconductor version: Release (3.19)
This package contains ARACNe-inferred networks from TCGA tumor datasets. It also contains a function to export them into plain-text format.
Author: Federico M. Giorgi
Maintainer: Federico M. Giorgi <federico.giorgi at gmail.com>, Mariano Alvarez <reef103 at gmail.com>
Citation (from within R, enter
citation("aracne.networks")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("aracne.networks")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("aracne.networks")
Using aracne.networks | R Script | |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | CancerData, ExperimentData, Genome, Homo_sapiens_Data |
Version | 1.30.0 |
License | file LICENSE |
Depends | R (>= 3.3), viper |
Imports | |
System Requirements | |
URL |
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Linking To | |
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Depends On Me | |
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Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | aracne.networks_1.30.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/aracne.networks |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/aracne.networks |
Package Short Url | https://bioconductor.org/packages/aracne.networks/ |
Package Downloads Report | Download Stats |