TabulaMurisSenisData

DOI: 10.18129/B9.bioc.TabulaMurisSenisData    

Bulk and single-cell RNA-seq data from the Tabula Muris Senis project

Bioconductor version: Release (3.14)

This package provides access to RNA-seq data generated by the Tabula Muris Senis project via the Bioconductor project. The data is made available without restrictions by the Chan Zuckerberg Biohub. It is provided here without further processing, collected in the form of SingleCellExperiment objects.

Author: Charlotte Soneson [aut, cre] , Dania Machlab [aut] , Federico Marini [aut] , Stefania Astrologo [aut]

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

Citation (from within R, enter citation("TabulaMurisSenisData")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TabulaMurisSenisData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TabulaMurisSenisData")

 

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Details

biocViews ExperimentData, ExperimentHub, RNASeqData, SingleCellData
Version 1.0.0
License MIT + file LICENSE
Depends
Imports ExperimentHub, SingleCellExperiment, HDF5Array, SummarizedExperiment, gdata, AnnotationHub
LinkingTo
Suggests ggplot2, testthat, knitr, rmarkdown, iSEE, BiocStyle
SystemRequirements
Enhances
URL https://github.com/fmicompbio/TabulaMurisSenisData
BugReports https://github.com/fmicompbio/TabulaMurisSenisData/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TabulaMurisSenisData_1.0.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/TabulaMurisSenisData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TabulaMurisSenisData
Package Short Url https://bioconductor.org/packages/TabulaMurisSenisData/
Package Downloads Report Download Stats

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