TENxBUSData
Single cell dataset from 10x in BUS format
Bioconductor version: 3.23 · Package version: 1.26.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Download Barcode, UMI, and Set (BUS) format of 10x datasets from within R. This package accompanies the package BUSpaRse, which can load BUS format into R as a sparse matrix, and which has utility functions related to using the C++ command line package bustools.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TENxBUSData")Details
| Maintainer | Lambda Moses <dlu2@caltech.edu> |
| Author | Lambda Moses [aut, cre] (ORCID: <https://orcid.org/0000-0002-7092-9427>) |
| License | BSD_2_clause + file LICENSE |
| URL | https://github.com/BUStools/TENxBUSData |
| Bug Reports | https://github.com/BUStools/TENxBUSData/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentData, ExperimentHub, ExpressionData, SequencingData, SingleCellData |
| Package Short Url | https://bioconductor.org/packages/TENxBUSData/ |
Citation
From within R, enter citation("TENxBUSData"):
Lambda Moses. TENxBUSData: Single cell dataset from 10x in BUS format. doi:10.18129/B9.bioc.TENxBUSData, R package version 1.26.0, https://bioconductor.org/packages/TENxBUSData.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | TENxBUSData_1.26.0.tar.gz |
Dependencies
Imports: ExperimentHub, AnnotationHub, utils, BiocGenerics
Reverse dependencies
Suggests Me (1): BUSpaRse