SomaticCancerAlterations

This is the released version of SomaticCancerAlterations; for the devel version, see SomaticCancerAlterations.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13

Somatic Cancer Alterations

Bioconductor version: Release (3.23)

Collection of somatic cancer alteration datasets

Author: Julian Gehring

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("SomaticCancerAlterations")):

Julian Gehring. SomaticCancerAlterations: Somatic Cancer Alterations. doi:10.18129/B9.bioc.SomaticCancerAlterations, R package version 1.48.0, https://bioconductor.org/packages/SomaticCancerAlterations.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SomaticCancerAlterations")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	CancerData, ExperimentData, Genome, NCI, Project1000genomes
Version	1.48.0
In Bioconductor since	BioC 2.13 (R-3.0) (13 years)
License	GPL-3
Depends	R (>= 3.5.0)
Imports	GenomicRanges, IRanges, S4Vectors
System Requirements
URL

Suggests	testthat, ggbio, ggplot2, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	SomaticSignatures
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	SomaticCancerAlterations_1.48.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/SomaticCancerAlterations
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/SomaticCancerAlterations
Package Short Url	https://bioconductor.org/packages/SomaticCancerAlterations/
Package Downloads Report	Download Stats