RTCGA.CNV
CNV (Copy-number variation) datasets from The Cancer Genome Atlas Project
Bioconductor version: 3.23 · Package version: 1.40.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Package provides CNV (based on Merge snp) datasets from The Cancer Genome Atlas Project for all cohorts types from http://gdac.broadinstitute.org/. Data format is explained here https://wiki.nci.nih.gov/display/TCGA/Retrieving +Data+Using+the+Data+Matrix. Data from 2015-11-01 snapshot.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RTCGA.CNV")Details
| Maintainer | Marcin Kosinski <m.p.kosinski@gmail.com> |
| Author | Przemyslaw Biecek <przemyslaw.biecek@gmail.com> |
| License | GPL-2 |
| Bug Reports | https://github.com/RTCGA/RTCGA/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | AnnotationData, ExperimentData |
| Package Short Url | https://bioconductor.org/packages/RTCGA.CNV/ |
Citation
From within R, enter citation("RTCGA.CNV"):
Przemyslaw Biecek. RTCGA.CNV: CNV (Copy-number variation) datasets from The Cancer Genome Atlas Project. doi:10.18129/B9.bioc.RTCGA.CNV, R package version 1.40.0, https://bioconductor.org/packages/RTCGA.CNV.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | RTCGA.CNV_1.40.0.tar.gz |
Reverse dependencies
Suggests Me (1): RTCGA