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HumanAffyData

GEO accession GSE64985 and ArrayExpress accession E-MTAB-62 as ExpressionSet objects

Bioconductor version: 3.23 · Package version: 1.38.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

Re-analysis of human gene expression data generated on the Affymetrix HG_U133PlusV2 (EH176) and Affymetrix HG_U133A (EH177) platforms. The original data were normalized using robust multiarray averaging (RMA) to obtain an integrated gene expression atlas across diverse biological sample types and conditions. The entire compendia comprisee 9395 arrays for EH176 and 5372 arrays for EH177.

DOI: 10.18129/B9.bioc.HumanAffyData

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("HumanAffyData")

Details

MaintainerBrad Nelms <bnelms.research@gmail.com>
AuthorBrad Nelms
LicenseArtistic-2.0
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsArrayExpress, ExperimentData, ExpressionData, GEO, Homo_sapiens_Data, MicroarrayData
Package Short Url https://bioconductor.org/packages/HumanAffyData/

Citation

From within R, enter citation("HumanAffyData"):

Brad Nelms. HumanAffyData: GEO accession GSE64985 and ArrayExpress accession E-MTAB-62 as ExpressionSet objects. doi:10.18129/B9.bioc.HumanAffyData, R package version 1.38.0, https://bioconductor.org/packages/HumanAffyData.

Generated from the package metadata; it may differ from the package's own citation.

Download

Follow the installation instructions to use this package in your R session.

Source packageHumanAffyData_1.38.0.tar.gz
Dependencies

Depends: ExperimentHub, Biobase, R (>= 3.3)

Suggests: BiocStyle

Reverse dependencies

Suggests Me (1): CellMapper