DoReMiTra
Orchestrating Blood Radiation Transcriptomic Data
Bioconductor version: 3.23 · Package version: 1.2.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
DoReMiTra is an R data package providing access to curated transcriptomic datasets related to blood radiation, with a focus on neutron, x-ray, and gamma ray studies. It is designed to facilitate radiation biology research and support data exploration and reproducibility in radiation transcriptomics. All datasets are provided as SummarizedExperiment objects, allowing seamless integration with the Bioconductor ecosystem.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DoReMiTra")Details
| Maintainer | Ahmed Salah <ahhassan@uni-mainz.de> |
| Author | Ahmed Salah [aut, cre] (ORCID: <https://orcid.org/0000-0001-7003-4466>), Federico Marini [aut] (ORCID: <https://orcid.org/0000-0003-3252-7758>) |
| License | MIT + file LICENSE |
| URL | https://github.com/AhmedSAHassan/DoReMiTra |
| Bug Reports | https://github.com/AhmedSAHassan/DoReMiTra/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentData, ExperimentHub, ExpressionData, GEO, PackageTypeData, RNASeqData |
| Package Short Url | https://bioconductor.org/packages/DoReMiTra/ |
Citation
From within R, enter citation("DoReMiTra"):
Ahmed Salah, Federico Marini. DoReMiTra: Orchestrating Blood Radiation Transcriptomic Data. doi:10.18129/B9.bioc.DoReMiTra, R package version 1.2.0, https://bioconductor.org/packages/DoReMiTra.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | DoReMiTra_1.2.0.tar.gz |
Dependencies
Depends: R (>= 4.5.0)
Imports: ExperimentHub, SummarizedExperiment, AnnotationHub, utils, glue, S4Vectors, scater
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, BiocStyle, DT