ChIPXpressData

This is the released version of ChIPXpressData; for the devel version, see ChIPXpressData.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11

ChIPXpress Pre-built Databases

Bioconductor version: Release (3.23)

Contains pre-built mouse (GPL1261) and human (GPL570) database of gene expression profiles to be used for ChIPXpress ranking.

Author: George Wu

Maintainer: George Wu <gewu at jhsph.edu>

Citation (from within R, enter citation("ChIPXpressData")):

George Wu. ChIPXpressData: ChIPXpress Pre-built Databases. doi:10.18129/B9.bioc.ChIPXpressData, R package version 1.50.0, https://bioconductor.org/packages/ChIPXpressData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ChIPXpressData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, GEO, Homo_sapiens_Data, Mus_musculus_Data
Version	1.50.0
In Bioconductor since	BioC 2.11 (R-2.15) (14 years)
License	GPL (>=2)
Depends	bigmemory
Imports
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me	ChIPXpress
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ChIPXpressData_1.50.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/ChIPXpressData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ChIPXpressData
Package Short Url	https://bioconductor.org/packages/ChIPXpressData/
Package Downloads Report	Download Stats