scAnnotatR.models

DOI: 10.18129/B9.bioc.scAnnotatR.models    

Pretrained models for scAnnotatR package

Bioconductor version: Release (3.14)

Pretrained models for scAnnotatR package. These models can be used to automatically classify several (immune) cell types in human scRNA-seq data.

Author: Vy Nguyen [aut] , Johannes Griss [cre]

Maintainer: Johannes Griss <johannes.griss at meduniwien.ac.at>

Citation (from within R, enter citation("scAnnotatR.models")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("scAnnotatR.models")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scAnnotatR.models")

 

HTML R Script 1. Introduction to scAnnotatR
PDF   Reference Manual
Text   LICENSE

Details

biocViews AnnotationData, AnnotationHub, FunctionalAnnotation, Homo_sapiens
Version 0.99.10
License MIT + file LICENSE
Depends R (>= 4.1)
Imports
LinkingTo
Suggests scAnnotatR, knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package scAnnotatR.models_0.99.10.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url https://bioconductor.org/packages/scAnnotatR.models/
Package Downloads Report Download Stats

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