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scAnnotatR.models

Pretrained models for scAnnotatR package


Bioconductor version: Release (3.18)

Pretrained models for scAnnotatR package. These models can be used to automatically classify several (immune) cell types in human scRNA-seq data.

Author: Vy Nguyen [aut] , Johannes Griss [cre]

Maintainer: Johannes Griss <johannes.griss at meduniwien.ac.at>

Citation (from within R, enter citation("scAnnotatR.models")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("scAnnotatR.models")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scAnnotatR.models")
1. Introduction to scAnnotatR HTML R Script
Reference Manual PDF
LICENSE Text

Details

biocViews AnnotationData, AnnotationHub, FunctionalAnnotation, Homo_sapiens
Version 0.99.10
License MIT + file LICENSE
Depends R (>= 4.1)
Imports
System Requirements
URL
See More
Suggests scAnnotatR, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package scAnnotatR.models_0.99.10.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/scAnnotatR.models/
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