phastCons100way.UCSC.hg38

DOI: 10.18129/B9.bioc.phastCons100way.UCSC.hg38    

UCSC phastCons conservation scores for hg38

Bioconductor version: Release (3.8)

Store UCSC phastCons conservation scores for the human genome (hg38) calculated from multiple alignments with other 99 vertebrate species.

Author: Robert Castelo [aut, cre]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("phastCons100way.UCSC.hg38")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("phastCons100way.UCSC.hg38", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.7.1
License Artistic-2.0
Depends R (>= 3.0.0), GenomicScores(>= 1.3.19)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome
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Depends On Me
Imports Me primirTSS
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package phastCons100way.UCSC.hg38_3.7.1.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/phastCons100way.UCSC.hg38/
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