phastCons100way.UCSC.hg38
UCSC phastCons conservation scores for hg38
Bioconductor version: 3.23 · Package version: 3.7.1
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Store UCSC phastCons conservation scores for the human genome (hg38) calculated from multiple alignments with other 99 vertebrate species.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("phastCons100way.UCSC.hg38")Details
| Maintainer | Robert Castelo <robert.castelo@upf.edu> |
| Author | Robert Castelo [aut, cre] |
| License | Artistic-2.0 |
| Source branch | RELEASE_3_23 |
| biocViews | AnnotationData, Genetics, GenomicScores, Homo_sapiens |
| Package Short Url | https://bioconductor.org/packages/phastCons100way.UCSC.hg38/ |
Citation
From within R, enter citation("phastCons100way.UCSC.hg38"):
Robert Castelo. phastCons100way.UCSC.hg38: UCSC phastCons conservation scores for hg38. doi:10.18129/B9.bioc.phastCons100way.UCSC.hg38, R package version 3.7.1, https://bioconductor.org/packages/phastCons100way.UCSC.hg38.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | phastCons100way.UCSC.hg38_3.7.1.tar.gz |
Dependencies
Depends: R (>= 3.0.0), GenomicScores (>= 1.3.19)
Imports: utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome