SomaScan.db

DOI: 10.18129/B9.bioc.SomaScan.db  

Somalogic SomaScan Annotation Data

Bioconductor version: Release (3.18)

An R package providing extended biological annotations for the SomaScan Assay, a proteomics platform developed by SomaLogic Operating Co., Inc. The annotations in this package were assembled using data from public repositories. For more information about the SomaScan assay and its data, please reference the 'SomaLogic/SomaLogic-Data' GitHub repository.

Author: Amanda Hiser [cre, aut] , SomaLogic Operating Co., Inc. [cph, fnd]

Maintainer: Amanda Hiser <ahiser at somalogic.com>

Citation (from within R, enter citation("SomaScan.db")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SomaScan.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SomaScan.db")

 

HTML R Script Advanced Exploration of the SomaScan Menu
HTML R Script Example ADAT Workflow Using SomaScan.db
HTML R Script Introduction to SomaScan.db
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews AnnotationData, ChipDb, Homo_sapiens
Version 0.99.7
License MIT + file LICENSE
Depends R (>= 4.3.0), AnnotationDbi(>= 1.56.2), methods
Imports DBI, org.Hs.eg.db(>= 3.14.0)
LinkingTo
Suggests annotate, BiocStyle, dplyr, GO.db, hgu95av2.db, KEGGREST, knitr, rmarkdown, SomaDataIO, testthat (>= 3.0.0), withr
SystemRequirements
Enhances
URL https://somalogic.com https://github.com/SomaLogic/SomaScan.db/
BugReports https://github.com/SomaLogic/SomaScan.db/issues
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SomaScan.db_0.99.7.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/SomaScan.db/
Package Downloads Report Download Stats

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