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PANTHER.db

This is the released version of PANTHER.db; for the devel version, see PANTHER.db.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13

A set of annotation maps describing the entire PANTHER Gene Ontology


Bioconductor version: Release (3.23)

A set of annotation maps describing the entire Gene Ontology assembled using data from PANTHER.

Author: Julius Muller [aut, cre] ORCID iD ORCID: 0000-0002-1046-2968

Maintainer: Julius Muller <mail at jmuller.eu>

Citation (from within R, enter citation("PANTHER.db")):

Julius Muller. PANTHER.db: A set of annotation maps describing the entire PANTHER Gene Ontology. doi:10.18129/B9.bioc.PANTHER.db, R package version 1.0.12, https://bioconductor.org/packages/PANTHER.db.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PANTHER.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PANTHER.db")
PANTHER.db: An annotation package to access the PANTHER Classification System HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews AnnotationData, AnnotationHub, FunctionalAnnotation
Version1.0.12
In Bioconductor sinceBioC 2.13 (R-3.0) (13 years)
License Artistic-2.0
Depends AnnotationDbi, AnnotationHub, utils, methods, RSQLite
Imports BiocFileCache (>= 1.10.1)
System Requirements
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Suggests RUnit, knitr, BiocStyle, rmarkdown
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PANTHER.db_1.0.12.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/PANTHER.db/
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